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Bioinformatics/Genomics, general

Protocols 1-10 of 66 total displayed.

Most recent content (1 Dec 2008)
Emerging Model Organisms Icon

The Demosponge Amphimedon queenslandica: Reconstructing the Ancestral Metazoan Genome and Deciphering the Origin of Animal Multicellularity
Bernard M. Degnan, Maja Adamska, Alina Craigie, Sandie M. Degnan, Bryony Fahey, Marie Gauthier, John N.A. Hooper, Claire Larroux, Sally P. Leys, Erica Lovas, and Gemma S. Richards
CSH Protocols; 2008; doi:10.1101/pdb.emo108 [Abstract] [Full text]

Past content (since May 2006)
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Browsing HapMap Data Using the Genome Browser
Albert Vernon Smith
CSH Protocols; 2008; doi:10.1101/pdb.prot5023 [Abstract] [Full text]

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Generating HapMap Data Text Reports Using the Genome Browser
Albert Vernon Smith
CSH Protocols; 2008; doi:10.1101/pdb.prot5024 [Abstract] [Full text]

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Manipulating HapMap Data Using HaploView
Albert Vernon Smith
CSH Protocols; 2008; doi:10.1101/pdb.prot5025 [Abstract] [Full text]

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Retrieving HapMap Data Using HapMart
Albert Vernon Smith
CSH Protocols; 2008; doi:10.1101/pdb.prot5026 [Abstract] [Full text]

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Retrieving HapMap Data via Bulk Download
Albert Vernon Smith
CSH Protocols; 2008; doi:10.1101/pdb.prot5027 [Abstract] [Full text]

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Using PAM Matrices in Sequence Alignments
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top38 [Abstract] [Full text]

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Using BLOSUM in Sequence Alignments
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top39 [Abstract] [Full text]

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Using Gaps and Gap Penalties to Optimize Pairwise Sequence Alignments
David W. Mount
CSH Protocols; 2008; doi:10.1101/pdb.top40 [Abstract] [Full text]

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Copy Number Variation Detection via High-Density SNP Genotyping
Kai Wang and Maja Bucan
CSH Protocols; 2008; doi:10.1101/pdb.top46 [Abstract] [Full text]

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