DNA Modification/Epigenetics

Chicken Erythrocyte Histone Octamer Preparation
Craig L. Peterson and Jeffrey C. Hansen
CSH Protocols; 2008; doi:10.1101/pdb.prot5112 [Abstract] [Full text]

Salt Gradient Dialysis Reconstitution of Nucleosomes
Craig L. Peterson
CSH Protocols; 2008; doi:10.1101/pdb.prot5113 [Abstract] [Full text]

DNA Methylation Analysis of Human Imprinted Loci by Bisulfite Genomic Sequencing
Vanessa T. Angeles and Renee A. Reijo Pera
CSH Protocols; 2008; doi:10.1101/pdb.prot5046 [Abstract] [Full text]

Coimmunoprecipitation (co-IP) of Nuclear Proteins and Chromatin Immunoprecipitation (ChIP) from Arabidopsis
Berthe Katrine Fiil, Jin-Long Qiu, Klaus Petersen, Morten Petersen, and John Mundy
CSH Protocols; 2008; doi:10.1101/pdb.prot5049 [Abstract] [Full text]

Mapping Protein Distributions on Polytene Chromosomes by Immunostaining
Renato Paro
CSH Protocols; 2008; doi:10.1101/pdb.prot4714 [Abstract] [Full text]

DNA Immunoprecipitation (DIP) for the Determination of DNA-Binding Specificity
Andrea J. Gossett and Jason D. Lieb
CSH Protocols; 2008; doi:10.1101/pdb.prot4972 [Abstract] [Full text]

Methylated CpG Island Amplification and Microarray (MCAM) for High-Throughput Analysis of DNA Methylation
Marcos R. H. Estécio, Pearlly S. Yan, Tim H-M. Huang, and Jean-Pierre J. Issa
CSH Protocols; 2008; doi:10.1101/pdb.prot4974 [Abstract] [Full text]

In Vitro Histone Methyltransferase Assay
Ian M. Fingerman, Hai-Ning Du, and Scott D. Briggs
CSH Protocols; 2008; doi:10.1101/pdb.prot4939 [Abstract] [Full text]

Development of Mammalian Cell Lines with lac Operator-Tagged Chromosomes
Yuri G. Strukov and Andrew S. Belmont
CSH Protocols; 2008; doi:10.1101/pdb.prot4903 [Abstract] [Full text]

Micrococcal Nuclease-Southern Blot Assay: I. MNase and Restriction Digestions
Michael Carey and Stephen T. Smale
CSH Protocols; 2007; doi:10.1101/pdb.prot4890 [Abstract] [Full text]