Image Analysis

Imaging Single Molecules Using Total Internal Reflection Fluorescence Microscopy (TIRFM)
Samara L. Reck-Peterson, Nathan D. Derr, and Nico Stuurman
Cold Spring Harb Protoc; 2010; doi:10.1101/pdb.top73 [Abstract] [Full text]

Determining Single-Molecule Intensity as a Function of Power Density
Samara L. Reck-Peterson, Nathan D. Derr, and Nico Stuurman
Cold Spring Harb Protoc; 2010; doi:10.1101/pdb.prot5398 [Abstract] [Full text]

Imaging Single Molecular Motor Motility with Total Internal Reflection Fluorescence Microscopy (TIRFM)
Samara L. Reck-Peterson, Nathan D. Derr, and Nico Stuurman
Cold Spring Harb Protoc; 2010; doi:10.1101/pdb.prot5399 [Abstract] [Full text]

Live Cell Imaging of Plants
Yuda Fang and David L. Spector
Cold Spring Harb Protoc; 2010; doi:10.1101/pdb.top68 [Abstract] [Full text]

Computational Image Analysis of Cellular Dynamics: A Case Study Based on Particle Tracking
Khuloud Jaqaman and Gaudenz Danuser
Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.top65 [Abstract] [Full text]

Imaging Synaptogenesis by Measuring Accumulation of Synaptic Proteins
Camin Dean and Peter Scheiffele
Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5315 [Abstract] [Full text]

In Vivo Imaging of Mammalian Cells: Image Acquisition and Analysis
Jason R. Swedlow, Paul D. Andrews, and Melpomeni Platani
Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.ip70 [Abstract] [Full text]

Use of Fluorescence In Situ Hybridization and the daime Image Analysis Program for the Cultivation-Independent Quantification of Microorganisms in Environmental and Medical Samples
Holger Daims
Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5253 [Abstract] [Full text]

Imaging Real-Time Gene Expression in Living Systems with Single-Transcript Resolution: Image Analysis of Single mRNA Transcripts
Amber L. Wells, John S. Condeelis, Robert H. Singer, and Daniel Zenklusen
Cold Spring Harb Protoc; 2007; doi:10.1101/pdb.prot4871 [Abstract] [Full text]

Imaging Real-Time Gene Expression in Living Systems with Single-Transcript Resolution: Single mRNA Particle Tracking with ImageJ-Based Analysis
Amber L. Wells, John S. Condeelis, Robert H. Singer, and Daniel Zenklusen
Cold Spring Harb Protoc; 2007; doi:10.1101/pdb.prot4872 [Abstract] [Full text]