Protocol

Offline Micro-IMAC Enrichment of Phosphoproteins

This protocol was adapted from “Proteomic Methods for Phosphorylation Site Mapping,” Chapter 9, in Proteins and Proteomics (ed. Simpson). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, USA, 2003.

INTRODUCTION

Immobilized metal affinity chromatography (IMAC) can be performed offline or online with μLC-ESI-MS/MS. The online configuration has been used successfully despite suboptimal low-level analysis due to the relative disparity between IMAC and μLC flow rates. With IMAC performed offline from μLC-ESI-MS, sample volumes from 1 to 100 μL can be loaded using a sample pressure vessel or an autosampling system equipped with a sample-trapping cartridge. This protocol describes the construction and use of a micro-IMAC column for the enrichment of phosphoproteins.

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