Table

Table 3. Software for HCS analysis

Name Manufacturer Web page
Off-the-shelf solutions
CellMine BioImagene http://www.bioimagene.com
AxioVision/Assay Builder Carl Zeiss http://www.zeiss.com/micro
MetaMorph Molecular Devices http://www.moleculardevices.com
Scan^R Analysis Olympus SIS http://www.olympus-sis.com
Acapella PerkinElmer http://las.perkinelmer.com
Columbus Conductor PerkinElmer http://las.perkinelmer.com
SciTegic Platform Accelrys http://accelrys.com
Cellomics BioApplications Thermo Scientific Cellomics http://www.thermo.com/hcs
HCi Thermo Scientific Cellomics http://www.thermo.com/hcs
BioConductor Open Source http://www.bioconductor.org
CellProfiler Open Source http://www.cellprofiler.org
Libraries for customized solutions
ImageJ Open Source http://rsb.info.nih.gov/ij
VIGRA Open Source http://hci.iwr.uni-heidelberg.de/vigra/
Aphelion ADCIS http://www.adcis.net
Cellenger Definiens http://www.definiens.com
MATLAB MathWorks http://www.mathworks.com
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  1. doi:10.1101/pdb.tab3top84 Cold Spring Harb Protoc 2010: pdb.tab3top84-

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