Recipe

Nuclei Extraction Buffer

Reagent Amount to add (for 10.5 mL) Final concentration (1×)
Triton X-100 (Sigma-Aldrich T8787)  52.5 µL  0.5%
Tris-HCl (1 m, pH 7.5; ThermoFisher 15567-027)   105 µL  10 mm
CaCl2 (1 m; Sigma-Aldrich C3306)  31.5 µL  3 mm
Sucrose (Sigma-Aldrich S0369)   882 mg 250 mm
DTT (0.1 m; Sigma-Aldrich D9779)  10.5 µL  0.1 mm
Complete Mini EDTA-free Proteinase Inhibitor Cocktail (Roche 11836170001) 1.5 tablets   1×
Phenylmethylsulfonyl fluoride (PMSF; 0.1 m in isopropanol; Fluka 93482)   105 µL  1 mm
Prepare the solution fresh before use. Add protease inhibitors (Complete Mini EDTA-free Proteinase Inhibitor Cocktail and PMSF) immediately before using the buffer.
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  1. doi:10.1101/pdb.rec104653 Cold Spring Harb Protoc 2018: pdb.rec104653- © 2018 Cold Spring Harbor Laboratory Press

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