Table of Contents

October 2009; 2009 (10)

Emerging Model Organisms

  • Maize (Zea mays): A Model Organism for Basic and Applied Research in Plant Biology

    • Josh Strable and
    • Michael J. Scanlon
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.emo132

  • The ‘Mother of Thousands’ (Kalanchoë daigremontiana): A Plant Model for Asexual Reproduction and CAM Studies

    • Helena Garcês and
    • Neelima Sinha
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.emo133

  • The Parasitoid Wasp Nasonia: An Emerging Model System with Haploid Male Genetics

    • John H. Werren and
    • David W. Loehlin
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.emo134

Topic Introduction

  • High-Resolution Dual-Trap Optical Tweezers with Differential Detection: An Introduction

    • Carlos Bustamante,
    • Yann R. Chemla,
    • and Jeffrey R. Moffitt
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.top60

Information Panels

  • Haploview: Visualization and Analysis of SNP Genotype Data

    • Jeffrey C. Barrett
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.ip71

  • High-Resolution Dual-Trap Optical Tweezers with Differential Detection: Managing Environmental Noise

    • Carlos Bustamante,
    • Yann R. Chemla,
    • and Jeffrey R. Moffitt
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.ip72

  • High-Resolution Dual-Trap Optical Tweezers with Differential Detection: Instrument Design

    • Carlos Bustamante,
    • Yann R. Chemla,
    • and Jeffrey R. Moffitt
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.ip73

  • High-Resolution Dual-Trap Optical Tweezers with Differential Detection: Data Collection and Instrument Calibration

    • Carlos Bustamante,
    • Yann R. Chemla,
    • and Jeffrey R. Moffitt
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.ip74

  • High-Resolution Dual-Trap Optical Tweezers with Differential Detection: Minimizing the Influence of Measurement Noise

    • Carlos Bustamante,
    • Yann R. Chemla,
    • and Jeffrey R. Moffitt
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.ip75

  • High-Resolution Dual-Trap Optical Tweezers with Differential Detection: Alignment of Instrument Components

    • Carlos Bustamante,
    • Yann R. Chemla,
    • and Jeffrey R. Moffitt
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.ip76

Protocols

  • Phenotypic Analysis of Arabidopsis Mutants: Oomycete Pathogens

    • Joseph D. Clarke
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot4984

  • Fixation and Paraffin-Embedding of Mouse Tissues for GFP Visualization

    • Hugo Vankelecom
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5298

  • Analysis of In Vivo Protein Complexes by Coimmunoprecipitation from Caenorhabditis elegans

    • Britta Jedamzik and
    • Christian R. Eckmann
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5299

  • Analysis of RNA-Protein Complexes by RNA Coimmunoprecipitation and RT-PCR Analysis from Caenorhabditis elegans

    • Britta Jedamzik and
    • Christian R. Eckmann
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5300

  • Fixing and Sectioning Tissue from the Plant Kalanchoë daigremontiana

    • Helena Garcês and
    • Neelima Sinha
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5301

  • In Situ Hybridization in the Plant Kalanchoë daigremontiana

    • Helena Garcês and
    • Neelima Sinha
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5302

  • Transformation of the Plant Kalanchoë daigremontiana using Agrobacterium tumefaciens

    • Helena Garcês and
    • Neelima Sinha
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5303

  • Extraction of DNA from the Plant Kalanchoë daigremontiana

    • Helena Garcês and
    • Neelima Sinha
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5304

  • Extraction of RNA from the Plant Kalanchoë daigremontiana

    • Helena Garcês and
    • Neelima Sinha
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5305

  • Formation and Use of Water-Soluble Lipopolymer-pDNA and Lipopeptide-pDNA Complexes

    • Ram I. Mahato,
    • Zhaoyang Ye,
    • and Sung Wan Kim
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5306

  • Strain Maintenance of Nasonia vitripennis (Parasitoid Wasp)

    • John H. Werren and
    • David W. Loehlin
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5307

  • Rearing Sarcophaga bullata Fly Hosts for Nasonia (Parasitoid Wasp)

    • John H. Werren and
    • David W. Loehlin
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5308

  • Egg Collection for Nasonia (Parasitoid Wasp)

    • John H. Werren and
    • David W. Loehlin
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5309

  • Virgin Collection and Haplodiploid Crossing Methods in Nasonia (Parasitoid Wasp)

    • John H. Werren and
    • David W. Loehlin
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5310

  • Larval RNAi in Nasonia (Parasitoid Wasp)

    • John H. Werren,
    • David W. Loehlin,
    • and Jonathan D. Giebel
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5311

  • Curing Wolbachia Infections in Nasonia (Parasitoid Wasp)

    • John H. Werren and
    • David W. Loehlin
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5312

  • Field Collection of Nasonia (Parasitoid Wasp) Using Baits

    • John H. Werren and
    • David W. Loehlin
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5313

  • Quantitative Real-Time RT-PCR (qRT-PCR) of Zebrafish Transcripts: Optimization of RNA Extraction, Quality Control Considerations, and Data Analysis

    • Chuan-Ching Lan,
    • Rongying Tang,
    • Ivone Un San Leong,
    • and Donald R. Love
    Cold Spring Harb Protoc; 2009; doi:10.1101/pdb.prot5314
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This Issue

October 2009; 2009 (10)
Cover
  1. Emerging Model Organisms
  2. Topic Introduction
  3. Information Panels
  4. Protocols

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