TABLE 1.
Programs for the identification of CpG islands
| Organization | URL | Availability | OS compatibility | Browser compatibility |
|---|---|---|---|---|
| European Bioinformatics Institute's EMBOSS CpG Plot/Report/Isochore | http://www.ebi.ac.uk/Tools/emboss/cpgplot/index.html | Free (online) | ||
| University of Lyon's CpGProD | http://pbil.univ-lyon1.fr/software/cpgprod_query.html | Free (online) | Mac or Windows | |
| UHN Microarray Centre's Human CpG Island Database | http://data.microarrays.ca/cpg/index.htm | Free (online) | ||
| Bioinformatics.org's Sequence Manipulation Suite | http://www.bioinformatics.org/sms/ | Free (online) | Mac or Windows | Firefox, Safari, Netscape, IE |
| QUMA | http://quma.cdb.riken.jp/ | Free (online) | Mac or Windows | Firefox, Safari, Opera, IE |
